Dear Allen,

The Izhikevich model (as published by the author) has some numerical issues, which the Izhikevich model (in the NEST source) does not have. Some of the phenomena reported in the polychronization papers can be accounted for by these instabilities in the implementation. Also, the STDP model used in the original paper does not perfectly match the STDP synapse shipped with NEST. We investigated this quite thoroughly in this paper:

https://www.frontiersin.org/articles/10.3389/fninf.2018.00046/full

for which the complete code (including the relevant STDP synapse variant) is available:

https://github.com/INM-6/reproducing-polychronization

Hope this helps!

All the best,

Abigail


On 22.11.21 03:57, Allen Rabayda wrote:
Dear Nest Users,

  Has anyone used any NEST Synapse Models to create Gamma Rhythms during a simulation with the NEST Izhikevich Neuron model?  

  My simulation, which uses the Stdp-Synapse model (additive type) does not appear to be converging into gamma rhythms (w/bi-model wt distribution) using super-threshold poisson point process (ref: Polychronization Computation With Spikes (Izhikevich, 2006), 
  • DOI: 10.1162/089976606775093882)




  •   Thanks for any suggestions,

    Best Regards,
    --Allen

    _______________________________________________
    NEST Users mailing list -- users@nest-simulator.org
    To unsubscribe send an email to users-leave@nest-simulator.org
    
    -- 
    Prof. Dr. Abigail Morrison
    
    IAS-6 / INM-6 / SimLab Neuroscience
    Jülich Research Center
    
    &
    
    Computer Science 3 - Software Engineering
    RWTH Aachen
    
    http://www.fz-juelich.de/inm/inm-6
    http://www.fz-juelich.de/ias/jsc/slns
    http://www.se-rwth.de
    
    Office:   +49 2428 8097504
    Fax # :   +49 2461 61-9460
    Pronouns: she/her


    ------------------------------------------------------------------------------------------------
    ------------------------------------------------------------------------------------------------
    Forschungszentrum Juelich GmbH
    52425 Juelich
    Sitz der Gesellschaft: Juelich
    Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
    Vorsitzender des Aufsichtsrats: MinDir Volker Rieke
    Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender),
    Karsten Beneke (stellv. Vorsitzender), Prof. Dr. Astrid Lambrecht,
    Prof. Dr. Frauke Melchior
    ------------------------------------------------------------------------------------------------
    ------------------------------------------------------------------------------------------------