30 Aug
2023
30 Aug
'23
6:42 a.m.
Dear all,
I have installed nestml via conda and developed a code describing an LIF
neuron with bi-exponential synaptic currents including NMDA, while the
charge mediated by AMPA and NMDA receptors are not independent. When I try
to compile the .nestml file, it gives me an error as:
from pynestml.frontend.pynestml_frontend import generate_nest_target
WARNING:root:PyGSL is not available. The stiffness test will be skipped.
WARNING:root:Error when importing: No module named 'pygsl'
In [2]:
generate_nest_target(input_path="/home/hrezaei/neuron_model_NMDA.nestml",
...: target_path="/tmp/nestml-component",
...: logging_level="ERROR")
line 61:4 extraneous input 'end' expecting {DEDENT, 'function',
'state',
'parameters', 'internals', 'update', 'equations',
'input', 'output'}
line 63:4 extraneous input 'equations' expecting {<EOF>, NEWLINE,
'neuron',
'synapse'}
line 64:8 extraneous input ' ' expecting {<EOF>, NEWLINE,
'neuron',
'synapse'}
line 67:8 extraneous input 'kernel' expecting {<EOF>, NEWLINE,
'neuron',
'synapse'}
line 70:8 extraneous input 'kernel' expecting {<EOF>, NEWLINE,
'neuron',
'synapse'}
...
r"""Generate and build code for NEST Simulator.
Parameters
A dictionary containing additional options for the target code generator.
"""
I was wondering what the reason could be. I would appreciate it if you
could help.
Thanks in advance.
Best,
Hedyeh